Post-processing long pairwise alignments

Zhang, Z.; Berman, P.; Wiehe, Thomas; Miller, W.

doi:10.1093/bioinformatics/15.12.1012

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Post-processing long pairwise alignments

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Wiehe, Thomas
Department of Genetics and Evolution, MPI for Chemical Ecology, Max Planck Society;

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http://dx.doi.org/10.1093/bioinformatics/15.12.1012
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Citation

Zhang, Z., Berman, P., Wiehe, T., & Miller, W. (1999). Post-processing long pairwise alignments. Bioinformatics, 15(12), 1012-1019. doi:10.1093/bioinformatics/15.12.1012.

Cite as: https://hdl.handle.net/11858/00-001M-0000-0012-B2C2-D

Abstract

Motivation: The local alignment problem for two sequences requires determining similar regions one from each sequence, and aligning those regions. For alignments computed by dynamic programming, current approaches for selecting similar regions may have