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Journal Article

A redox-mediated Kemp eliminase

MPS-Authors

Li,  Aitao
Philipps-Universität Marburg, Fachbereich Chemie;
Research Department Reetz, Max-Planck-Institut für Kohlenforschung, Max Planck Society;

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Ilie,  Adriana
Philipps-Universität Marburg, Fachbereich Chemie;
Research Department Reetz, Max-Planck-Institut für Kohlenforschung, Max Planck Society;

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Reetz,  Manfred T.
Philipps-Universität Marburg, Fachbereich Chemie;
Research Department Reetz, Max-Planck-Institut für Kohlenforschung, Max Planck Society;

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Citation

Li, A., Wang, B., Ilie, A., Dubey, K. D., Bange, G., Korendovych, I. V., et al. (2017). A redox-mediated Kemp eliminase. Nature Communications, 8: 14876. doi:10.1038/ncomms14876.


Cite as: https://hdl.handle.net/11858/00-001M-0000-002D-6F36-8
Abstract
The acid/base-catalysed Kemp elimination of 5-nitro-benzisoxazole forming 2-cyano-4- nitrophenol has long served as a design platform of enzymes with non-natural reactions, providing new mechanistic insights in protein science. Here we describe an alternative concept based on redox catalysis by P450-BM3, leading to the same Kemp product via a fundamentally different mechanism. QM/MM computations show that it involves coordination of the substrate’s N-atom to haem-Fe(II) with electron transfer and concomitant N–O heterolysis liberating an intermediate having a nitrogen radical moiety Fe(III)–N and a phenoxyl anion. Product formation occurs by bond rotation and H-transfer. Two rationally chosen point mutations cause a notable increase in activity. The results shed light on the prevailing mechanistic uncertainties in human P450-catalysed metabolism of the immunomodulatory drug leflunomide, which likewise undergoes redox-mediated Kemp elimination by P450-BM3. Other isoxazole-based pharmaceuticals are probably also metabolized by a redox mechanism. Our work provides a basis for designing future artificial enzymes.