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MtrA of the sodium ion pumping methyltransferase binds cobalamin in a unique mode

MPG-Autoren

Wagner,  Tristan
Max Planck Institute for Terrestrial Microbiology, Max Planck Society;

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Ermler,  Ulrich
Department of Molecular Membrane Biology, Max Planck Institute of Biophysics, Max Planck Society;

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Shima,  Seigo
Max Planck Institute for Terrestrial Microbiology, Max Planck Society;
PRESTO, Japan Science and Technology Agency (JST);

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Zitation

Wagner, T., Ermler, U., & Shima, S. (2016). MtrA of the sodium ion pumping methyltransferase binds cobalamin in a unique mode. Scientific Reports, 6: 28226. doi:doi:10.1038/srep28226.


Zitierlink: https://hdl.handle.net/11858/00-001M-0000-002D-1D2F-3
Zusammenfassung
In the three domains of life, vitamin B12 (cobalamin) is primarily used in methyltransferase and isomerase reactions. The methyltransferase complex MtrA–H of methanogenic archaea has a key function in energy conservation by catalysing the methyl transfer from methyltetrahydromethanopterin to coenzyme M and its coupling with sodium-ion translocation. The cobalamin-binding subunit MtrA is not homologous to any known B12-binding proteins and is proposed as the motor of the sodium-ion pump. Here, we present crystal structures of the soluble domain of the membrane-associated MtrA from Methanocaldococcus jannaschii and the cytoplasmic MtrA homologue/cobalamin complex from Methanothermus fervidus. The MtrA fold corresponds to the Rossmann-type α/β fold, which is also found in many cobalamin-containing proteins. Surprisingly, the cobalaminbinding site of MtrA differed greatly from all the other cobalamin-binding sites. Nevertheless, the hydrogen-bond linkage at the lower axial-ligand site of cobalt was equivalently constructed to that found in other methyltransferases and mutases. A distinct polypeptide segment fixed through the hydrogen-bond linkage in the relaxed Co(III) state might be involved in propagating the energy released upon corrinoid demethylation to the sodium-translocation site by a conformational change