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Journal Article

Searching the literature for proteins facilitates the identification of biological processes, if advanced methods of analysis are linked: a case study on microgravity-caused changes in cells

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Bauer,  Johann
Scientific Service Groups, Max Planck Institute of Biochemistry, Max Planck Society;

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Schneider,  Sabine
Scientific Service Groups, Max Planck Institute of Biochemistry, Max Planck Society;

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http://www.tandfonline.com/doi/full/10.1080/14789450.2016.1197775
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Citation

Bauer, J., Bussen, M., Wise, P., Wehland, M., Schneider, S., & Grimm, D. (2016). Searching the literature for proteins facilitates the identification of biological processes, if advanced methods of analysis are linked: a case study on microgravity-caused changes in cells. Expert Review of Proteomics, 13(7), 697-705. doi:10.1080/14789450.2016.1197775.


Cite as: https://hdl.handle.net/11858/00-001M-0000-002C-4CFE-A
Abstract
Background: More than one hundred reports were published about the characterization of cells from malignant and healthy tissues, as well as of endothelial cells and stem cells exposed to microgravity conditions.Methods: We retrieved publications about microgravity related studies on each type of cells, extracted the proteins mentioned therein and analyzed them aiming to identify biological processes affected by microgravity culture conditions.Results: The analysis revealed 66 different biological processes, 19 of them were always detected when papers about the four types of cells were analyzed.Conclusion: Since a response to the removal of gravity is common to the different cell types, some of the 19 biological processes could play a role in cellular adaption to microgravity. Applying computer programs, to extract and analyze proteins and genes mentioned in publications becomes essential for scientists interested to get an overview of the rapidly growing fields of gravitational biology and space medicine.