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Taxonomy Inference Using Kernel Dependence Measures

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Blaschko,  MB
Department Empirical Inference, Max Planck Institute for Biological Cybernetics, Max Planck Society;
Max Planck Institute for Biological Cybernetics, Max Planck Society;

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Gretton,  A
Department Empirical Inference, Max Planck Institute for Biological Cybernetics, Max Planck Society;
Max Planck Institute for Biological Cybernetics, Max Planck Society;

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MPIK-TR-181.pdf
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Citation

Blaschko, M., & Gretton, A.(2008). Taxonomy Inference Using Kernel Dependence Measures (181). Tübingen, Germany: Max Planck Institute for Biological Cybernetics.


Cite as: https://hdl.handle.net/11858/00-001M-0000-0013-C673-4
Abstract
We introduce a family of unsupervised algorithms, numerical taxonomy clustering, to simultaneously
cluster data, and to learn a taxonomy that encodes the relationship between the clusters. The algorithms
work by maximizing the dependence between the taxonomy and the original data. The resulting taxonomy is a
more informative visualization of complex data than simple clustering; in addition, taking into account the relations
between different clusters is shown to substantially improve the quality of the clustering, when compared
with state-of-the-art algorithms in the literature (both spectral clustering and a previous dependence maximization
approach). We demonstrate our algorithm on image and text data.