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TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing

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http://pubman.mpdl.mpg.de/cone/persons/resource/persons72720

von Haeseler,  Arndt
Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Max Planck Society;

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Zitation

Schmidt, H. A., Strimmer, K., Vingron, M., & von Haeseler, A. (2002). TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics, 18(3), 502-504.


Zitierlink: http://hdl.handle.net/11858/00-001M-0000-0010-0785-3
Zusammenfassung
TREE-PUZZLE is a program package for quartet-based maximum- likelihood phylogenetic analysis (formerly PUZZLE, Strimmer and von Haeseler, Mol Biol. Evol., 13, 964-969, 1996) that provides methods for reconstruction, comparison, and testing of trees and models on DNA as well as protein sequences. To reduce waiting time for larger datasets the tree reconstruction part of the software has been parallelized using message passing that runs on clusters of workstations as well as parallel computers.