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  Removing Contamination-Induced Reconstruction Artifacts from Cryo-electron Tomograms

Fernandez, J.-J., Laugks, U., Schaffer, M., Bäuerlein, F. J. B., Khoshouei, M., Baumeister, W., et al. (2016). Removing Contamination-Induced Reconstruction Artifacts from Cryo-electron Tomograms. BIOPHYSICAL JOURNAL, 110(4), 850-859. doi:10.1016/j.bpj.2015.10.043.

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 Urheber:
Fernandez, Jose-Jesus1, Autor
Laugks, Ulrike2, Autor           
Schaffer, Miroslava2, Autor           
Bäuerlein, Felix J. B.2, Autor           
Khoshouei, Maryam2, Autor           
Baumeister, Wolfgang2, Autor           
Lucic, Vladan2, Autor           
Affiliations:
1external, ou_persistent22              
2Baumeister, Wolfgang / Molecular Structural Biology, Max Planck Institute of Biochemistry, Max Planck Society, ou_1565142              

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Schlagwörter: ELECTRON-MICROSCOPY; NOISE-REDUCTION; PHASE PLATE; SEGMENTATION; SPECIMENS; DIFFUSION; NEURONS; FILTER; CELLS
 Zusammenfassung: Imaging of fully hydrated, vitrified biological samples by electron tomography yields structural information about cellular protein complexes in situ. Here we present a computational procedure that removes artifacts of three-dimensional reconstruction caused by contamination present in samples during imaging by electron microscopy. Applying the procedure to phantom data and electron tomograms of cellular samples significantly improved the resolution and the interpretability of tomograms. Artifacts caused by surface contamination associated with thinning by focused ion beam, as well as those arising from gold fiducial markers and from common, lower contrast contamination, could be removed. Our procedure is widely applicable and is especially suited for applications that strive to reach a higher resolution and involve the use of recently developed, state-of-the-art instrumentation.

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Sprache(n): eng - English
 Datum: 2016
 Publikationsstatus: Erschienen
 Seiten: 10
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: ISI: 000370763800013
DOI: 10.1016/j.bpj.2015.10.043
 Art des Abschluß: -

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Titel: BIOPHYSICAL JOURNAL
Genre der Quelle: Zeitschrift
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Affiliations:
Ort, Verlag, Ausgabe: 600 TECHNOLOGY SQUARE, 5TH FLOOR, CAMBRIDGE, MA 02139 USA : CELL PRESS
Seiten: - Band / Heft: 110 (4) Artikelnummer: - Start- / Endseite: 850 - 859 Identifikator: ISSN: 0006-3495