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  Construction of two YAC contigs in human Xp11.23-p11.22, one encompassing the loci OATL1, GATA, TFE3, and SYP, the other linking DXS255 to DXS146

Fisher, S. E., Hatchwell, E., Chand, A., Ockenden, N., Monaco, A. P., & Craig, I. W. (1995). Construction of two YAC contigs in human Xp11.23-p11.22, one encompassing the loci OATL1, GATA, TFE3, and SYP, the other linking DXS255 to DXS146. Genomics, 29(2), 496-502. doi:10.1006/geno.1995.9976.

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Fisher_Construction of Two YAC Contigs_Genomics_1995.pdf (Verlagsversion), 102KB
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Fisher_Construction of Two YAC Contigs_Genomics_1995.pdf
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 Urheber:
Fisher, Simon E.1, Autor           
Hatchwell, E., Autor
Chand, A., Autor
Ockenden, N., Autor
Monaco, A. P., Autor
Craig, I. W., Autor
Affiliations:
1Genetics Laboratory, Biochemistry Department, University of Oxford, South Parks Road, Oxford, OX1 3QU, ou_persistent22              

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 Zusammenfassung: We have constructed two YAC contigs in the Xp11.23-p11.22 interval of the human X chromosome, a region that was previously poorly characterized. One contig, of at least 1.4 Mb, links the pseudogene OATL1 to the genes GATA1, TFE3, and SYP and also contains loci implicated in Wiskott-Aldrich syndrome and synovial sarcoma. A second contig, mapping proximal to the first, is estimated to be over 2.1 Mb and links the hypervariable locus DXS255 to DXS146, and also contains a chloride channel gene that is responsible for hereditary nephrolithiasis. We have used plasmid rescue, inverse PCR, and Alu-PCR to generate 20 novel markers from this region, 1 of which is polymorphic, and have positioned these relative to one another on the basis of YAC analysis. The order of previously known markers within our contigs, Xpter-OATL1-GATA-TFE3-SYP-DXS255146- Xcen, agrees with genomic pulsed-field maps of the region. In addition, we have constructed a rare-cutter restriction map for a 710-kb region of the DXS255-DXS146 contig and have identified three CPG islands. These contigs and new markers will provide a useful resource for more detailed analysis of Xp11.23-p11.22, a region implicated in several genetic diseases.

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 Datum: 1995
 Publikationsstatus: Erschienen
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 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: DOI: 10.1006/geno.1995.9976
PMID: 8666400
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Titel: Genomics
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: San Diego, Calif.? : Academic Press
Seiten: - Band / Heft: 29 (2) Artikelnummer: - Start- / Endseite: 496 - 502 Identifikator: ISSN: 0888-7543
CoNE: https://pure.mpg.de/cone/journals/resource/954922649130