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  Predicting Response to Antiretroviral Treatment by Machine Learning: the EuResist Project

Zazzi, M., Incardona, F., Rosen-Zvi, M., Prosperi, M., Lengauer, T., Altmann, A., et al. (2012). Predicting Response to Antiretroviral Treatment by Machine Learning: the EuResist Project. Intervirology, 55(2), 123-127. doi:10.1159/000332008.

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Genre: Zeitschriftenartikel
Latex : Predicting Response to Antiretroviral Treatment by Machine Learning: the {EuResist} Project

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Urheber

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 Urheber:
Zazzi, Maurizio1, Autor
Incardona, Francesca1, Autor
Rosen-Zvi, Michal1, Autor
Prosperi, Mattia1, Autor
Lengauer, Thomas2, Autor           
Altmann, André2, Autor           
Sonnerborg, Anders1, Autor
Lavee, Tamar1, Autor
Schulter, Eugen1, Autor
Kaiser, Rolf1, Autor
Affiliations:
1External Organizations, ou_persistent22              
2Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society, ou_40046              

Inhalt

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Schlagwörter: Anti-HIV Agents/pharmacology/therapeutic use Artificial Intelligence Drug Resistance, Viral Genotype HIV Infections/drug therapy/*virology HIV-1/*drug effects/*genetics/isolation & purification Humans Microbial Sensitivity Tests/*methods
 Zusammenfassung: For a long time, the clinical management of antiretroviral drug resistance was based on sequence analysis of the HIV genome followed by estimating drug susceptibility from the mutational pattern that was detected. The large number of anti-HIV drugs and HIV drug resistance mutations has prompted the development of computer-aided genotype interpretation systems, typically comprising rules handcrafted by experts via careful examination of in vitro and in vivo resistance data. More recently, machine learning approaches have been applied to establish data-driven engines able to indicate the most effective treatments for any patient and virus combination. Systems of this kind, currently including the Resistance Response Database Initiative and the EuResist engine, must learn from the large data sets of patient histories and can provide an objective and accurate estimate of the virological response to different antiretroviral regimens. The EuResist engine was developed by a European consortium of HIV and bioinformatics experts and compares favorably with the most commonly used genotype interpretation systems and HIV drug resistance experts. Next-generation treatment response prediction engines may valuably assist the HIV specialist in the challenging task of establishing effective regimens for patients harboring drug-resistant virus strains. The extensive collection and accurate processing of increasingly large patient data sets are eagerly awaited to further train and translate these systems from prototype engines into real-life treatment decision support tools.

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Sprache(n): eng - English
 Datum: 2011-12-062012
 Publikationsstatus: Erschienen
 Seiten: -
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: -
 Identifikatoren: PMID: 22286881
DOI: 10.1159/000332008
URI: http://www.ncbi.nlm.nih.gov/pubmed/22286881
BibTex Citekey: Zazzi2012
Anderer: Local-ID: 855AC39B714E1C1AC1257B160035DD40-Zazzi2012
 Art des Abschluß: -

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Quelle 1

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Titel: Intervirology
Genre der Quelle: Zeitschrift
 Urheber:
Affiliations:
Ort, Verlag, Ausgabe: Basel : Karger
Seiten: - Band / Heft: 55 (2) Artikelnummer: - Start- / Endseite: 123 - 127 Identifikator: ISSN: 1423-0100
ISSN: 0300-5526