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  A "Crossomics" Study Analysing Variability of Different Components in Peripheral Blood of Healthy Caucasoid Individuals

Gruden, K., Hren, M., Herman, A., Blejec, A., Albrecht, T., Selbig, J., et al. (2012). A "Crossomics" Study Analysing Variability of Different Components in Peripheral Blood of Healthy Caucasoid Individuals. PLoS One, 7(1), e28761. doi:10.1371/journal.pone.0028761.

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Gruden-2012-A _Crossomics_ Study.pdf (Any fulltext), 558KB
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Gruden-2012-A _Crossomics_ Study.pdf
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 Creators:
Gruden, K.1, Author
Hren, M.1, Author
Herman, A.1, Author
Blejec, A.1, Author
Albrecht, T.1, Author
Selbig, J.2, Author           
Bauer, C.1, Author
Schuchardt, J.1, Author
Or-Guil, M.1, Author
Zupancic, K.1, Author
Svajger, U.1, Author
Stabuc, B.1, Author
Ihan, A.1, Author
Kopitar, A. N.1, Author
Ravnikar, M.1, Author
Knezevic, M.1, Author
Rozman, P.1, Author
Jeras, M.1, Author
Affiliations:
1External Organizations, ou_persistent22              
2BioinformaticsCRG, Cooperative Research Groups, Max Planck Institute of Molecular Plant Physiology, Max Planck Society, ou_1753315              

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Free keywords: messenger-rna expression gene-expression whole-blood reveals differences autoimmune-disease immune-system cells serum profiles cytokine
 Abstract: Background: Different immunotherapy approaches for the treatment of cancer and autoimmune diseases are being developed and tested in clinical studies worldwide. Their resulting complex experimental data should be properly evaluated, therefore reliable normal healthy control baseline values are indispensable. Methodology/Principal Findings: To assess intra- and inter-individual variability of various biomarkers, peripheral blood of 16 age and gender equilibrated healthy volunteers was sampled on 3 different days within a period of one month. Complex "crossomics'' analyses of plasma metabolite profiles, antibody concentrations and lymphocyte subset counts as well as whole genome expression profiling in CD4(+)T and NK cells were performed. Some of the observed age, gender and BMI dependences are in agreement with the existing knowledge, like negative correlation between sex hormone levels and age or BMI related increase in lipids and soluble sugars. Thus we can assume that the distribution of all 39.743 analysed markers is well representing the normal Caucasoid population. All lymphocyte subsets, 20% of metabolites and less than 10% of genes, were identified as highly variable in our dataset. Conclusions/Significance: Our study shows that the intra- individual variability was at least two-fold lower compared to the inter-individual one at all investigated levels, showing the importance of personalised medicine approach from yet another perspective.

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Language(s): eng - English
 Dates: 2012
 Publication Status: Issued
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 Identifiers: ISI: ISI:000301357100004
DOI: 10.1371/journal.pone.0028761
ISSN: 1932-6203
URI: ://000301357100004 http://www.plosone.org/article/fetchObjectAttachment.action?uri=info%3Adoi%2F10.1371%2Fjournal.pone.0028761&representation=PDF
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Title: PLoS One
Source Genre: Journal
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Pages: - Volume / Issue: 7 (1) Sequence Number: - Start / End Page: e28761 Identifier: -