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  Discriminative frequent subgraph mining with optimality guarantees

Thoma, M., Cheng H, Gretton, A., Han J, Kriegel H-P, Smola, A., Song L, Yu PS, Yan, X., & Borgwardt, K. (2010). Discriminative frequent subgraph mining with optimality guarantees. Statistical Analysis and Data Mining, 3(5), 302–318. doi:10.1002/sam.10084.

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Thoma, M, Author
Cheng H, Gretton, A1, Author           
Han J, Kriegel H-P, Smola, AJ2, Author           
Song L, Yu PS, Yan, X, Author
Borgwardt, KM2, Author           
Affiliations:
1Department Empirical Inference, Max Planck Institute for Biological Cybernetics, Max Planck Society, ou_1497795              
2Max Planck Institute for Biological Cybernetics, Max Planck Society, ou_1497794              

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 Abstract: The goal of frequent subgraph mining is to detect subgraphs that frequently occur in a dataset of graphs. In classification settings, one is often interested in discovering discriminative frequent subgraphs, whose presence or absence is indicative of the class membership of a graph. In this article, we propose an approach to feature selection on frequent subgraphs, called CORK, that combines two central advantages. First, it optimizes a submodular quality criterion, which means that we can yield a near-optimal solution using greedy feature selection. Second, our submodular quality function criterion can be integrated into gSpan, the state-of-the-art tool for frequent subgraph mining, and help to prune the search space for discriminative frequent subgraphs even during frequent subgraph mining.

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 Dates: 2010-10
 Publication Status: Issued
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 Identifiers: URI: http://onlinelibrary.wiley.com/doi/10.1002/sam.10084/pdf
DOI: 10.1002/sam.10084
BibTex Citekey: ThomaCGHKSSYYB2010
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Title: Statistical Analysis and Data Mining
Source Genre: Journal
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Pages: - Volume / Issue: 3 (5) Sequence Number: - Start / End Page: 302–318 Identifier: -