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  Fate of the H-NS-Repressed bgl Operon in Evolution of Escherichia coli

Sankar, T. S., Neelakanta, G., Sangal, V., Plum, G., Achtman, M., & Schnetz, K. (2009). Fate of the H-NS-Repressed bgl Operon in Evolution of Escherichia coli. PLoS Genetics, 5(3): e1000405.

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© 2009 Sankar et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
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Sankar, T. Sabari, Author
Neelakanta, Girish, Author
Sangal, Vartul1, Author           
Plum, Georg, Author
Achtman, Mark2, Author           
Schnetz, Karin, Author
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1Max-Planck Research Group RNA Biology, Max Planck Institute for Infection Biology, Max Planck Society, ou_1664150              
2Department of Molecular Biology, Max Planck Institute for Infection Biology, Max Planck Society, ou_1664147              

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Free keywords: COMPLETE GENOME SEQUENCE; BETA-GLUCOSIDES; PHOSPHOTRANSFERASE SYSTEM;; UROPATHOGENIC PROPERTIES; ERWINIA-CHRYSANTHEMI; STATIONARY-PHASE;; INDUCIBLE SYSTEM; GENE-TRANSFER; FOREIGN DNA; ARB GENES
 Abstract: In the enterobacterial species Escherichia coli and Salmonella enterica, expression of horizontally acquired genes with a higher than average AT content is repressed by the nucleoid-associated protein H-NS. A classical example of an H-NS-repressed locus is the bgl (aryl-beta,D-glucoside) operon of E. coli. This locus is "cryptic,'' as no laboratory growth conditions are known to relieve repression of bgl by H-NS in E. coli K12. However, repression can be relieved by spontaneous mutations. Here, we investigated the phylogeny of the bgl operon. Typing of bgl in a representative collection of E. coli demonstrated that it evolved clonally and that it is present in strains of the phylogenetic groups A, B1, and B2, while it is presumably replaced by a cluster of ORFans in the phylogenetic group D. Interestingly, the bgl operon is mutated in 20% of the strains of phylogenetic groups A and B1, suggesting erosion of bgl in these groups. However, bgl is functional in almost all B2 isolates and, in approximately 50% of them, it is weakly expressed at laboratory growth conditions. Homologs of bgl genes exist in Klebsiella, Enterobacter, and Erwinia species and also in low GC-content Gram-positive bacteria, while absent in E. albertii and Salmonella sp. This suggests horizontal transfer of bgl genes to an ancestral Enterobacterium. Conservation and weak expression of bgl in isolates of phylogenetic group B2 may indicate a functional role of bgl in extraintestinal pathogenic E. coli.

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Language(s): eng - English
 Dates: 2009-03
 Publication Status: Issued
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 Identifiers: eDoc: 439911
ISI: 000266320100011
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Title: PLoS Genetics
Source Genre: Journal
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Pages: - Volume / Issue: 5 (3) Sequence Number: e1000405 Start / End Page: - Identifier: ISSN: 1553-7390 %R e1000405 10.1371/journal.pgen.1000405