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  Minimum information requested in the annotation of biochemical models (MIRIAM)

Le Novère, N., Finney, A., Hucka, M., Bhalla, U. S., Campagne, F., Collado-Vides, J., et al. (2005). Minimum information requested in the annotation of biochemical models (MIRIAM). Nature Biotechnology, 23(12), 1509-1515. doi:10.1038/nbt1156.

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Genre: Zeitschriftenartikel
Alternativer Titel : Nat Biotechnol

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Le Novere et al. - Nat Biotech.pdf (beliebiger Volltext), 212KB
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Le Novere et al. - Nat Biotech.pdf
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 Urheber:
Le Novère, Nicolas, Autor
Finney, Andrew, Autor
Hucka, Michael, Autor
Bhalla, Upinder S., Autor
Campagne, Fabien, Autor
Collado-Vides, Julio, Autor
Crampin, Edmund J., Autor
Halstead, Matt, Autor
Klipp, Edda1, Autor           
Mendes, Pedro, Autor
Nielsen, Poul, Autor
Sauro, Herbert, Autor
Shapiro, Bruce, Autor
Snoep, Jacky L., Autor
Spence, Hugh D., Autor
Wanner, Barry L., Autor
Affiliations:
1Independent Junior Research Groups (OWL), Max Planck Institute for Molecular Genetics, Max Planck Society, ou_1433554              

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 Zusammenfassung: Most of the published quantitative models in biology are lost for the community because they are either not made available or they are insufficiently characterized to allow them to be reused. The lack of a standard description format, lack of stringent reviewing and authors' carelessness are the main causes for incomplete model descriptions. With today's increased interest in detailed biochemical models, it is necessary to define a minimum quality standard for the encoding of those models. We propose a set of rules for curating quantitative models of biological systems. These rules define procedures for encoding and annotating models represented in machine-readable form. We believe their application will enable users to (i) have confidence that curated models are an accurate reflection of their associated reference descriptions, (ii) search collections of curated models with precision, (iii) quickly identify the biological phenomena that a given curated model or model constituent represents and (iv) facilitate model reuse and composition into large subcellular models.

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Sprache(n): eng - English
 Datum: 2005-12-06
 Publikationsstatus: Erschienen
 Seiten: -
 Ort, Verlag, Ausgabe: -
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 Art der Begutachtung: -
 Identifikatoren: eDoc: 272389
DOI: 10.1038/nbt1156
 Art des Abschluß: -

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Titel: Nature Biotechnology
  Alternativer Titel : Nat Biotechnol
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: -
Seiten: - Band / Heft: 23 (12) Artikelnummer: - Start- / Endseite: 1509 - 1515 Identifikator: ISSN: 1087-0156