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  A universal method to produce in vitro transcripts with homogeneous 3 ' ends

Schurer, H., Lang, K., Schuster, J., & Mörl, M. (2002). A universal method to produce in vitro transcripts with homogeneous 3 ' ends. Nucleic Acids Research, 30(12): e56. doi:10.1093/nar/gnf055.

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 Urheber:
Schurer, H., Autor
Lang, K., Autor
Schuster, Jens1, Autor           
Mörl, Mario1, Autor           
Affiliations:
1Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Max Planck Society, ou_1497672              

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 Zusammenfassung: A method is described that allows a general drawback of In vitro transcription assays to be overcome: RNA polymerases tend to add extra nucleotides to the RNA 3' end that are not encoded In the linearized DNA template. Furthermore, these polymerases show a considerable rate of premature termination close to the RNA's 3' end. These features lead to a decreased yield of full- length transcripts and often make it difficult to determine and Isolate the correctly transcribed full-length RNA. The hammerhead ribozyme Is frequently used In cis to cleave off these extra nucleotides. However, the upstream sequence requirements of this ribozyme restrict Its general usability. In contrast, the hepatitis delta virus ribozyme has no such requirements and can therefore be applied to any RNA sequence In cis. Due to the catalytic activity of the ribozyme, the desired transcript is released as an RNA molecule with a homogeneous 3' end. The resulting 2',3'-cyclophosphate group of the released RNA can be easily and efficiently removed by T4 polynucleotide kinase treatment. The presented method can be applied for virtually any sequence to be transcribed and is therefore superior to other ribozyme strategies, suggesting possible applications In every field where transcripts with homogeneous Wends are required.

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Sprache(n): eng - English
 Datum: 2002-06-15
 Publikationsstatus: Erschienen
 Seiten: -
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: eDoc: 21668
DOI: 10.1093/nar/gnf055
ISI: 000176400000005
 Art des Abschluß: -

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Titel: Nucleic Acids Research
  Alternativer Titel : Nucleic Acids Res.
Genre der Quelle: Zeitschrift
 Urheber:
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Ort, Verlag, Ausgabe: -
Seiten: - Band / Heft: 30 (12) Artikelnummer: e56 Start- / Endseite: - Identifikator: ISSN: 0305-1048