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  Estimating the allele frequency of autosomal recessive disorders through mutational records and consanguinity: The homozygosity index (HI)

Gialluisi, A., Pippucci, T., Anikster, Y., Ozbek, U., Medlej-Hashim, M., Mégarbané, A., et al. (2012). Estimating the allele frequency of autosomal recessive disorders through mutational records and consanguinity: The homozygosity index (HI). Annals of Human Genetics, 76, 159-167. doi:10.1111/j.1469-1809.2011.00693.x.

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Gialluisi, Alessandro1, 2, 3, Autor           
Pippucci, Tommaso3, Autor
Anikster, Yair4, Autor
Ozbek, Ugur5, Autor
Medlej-Hashim, Myrna6, Autor
Mégarbané, Andre6, 7, Autor
Romeo, Giovanni3, Autor
Affiliations:
1International Max Planck Research School for Language Sciences, MPI for Psycholinguistics, Max Planck Society, Nijmegen, NL, ou_1119545              
2Language and Genetics Department, MPI for Psycholinguistics, Max Planck Society, Nijmegen, NL, ou_792549              
3Unità Operativa di Genetica Medica, Dipartimento di Scienze Ginecologiche, Ostetriche e Pediatriche, Policlinico Sant’Orsola Malpighi, Università di Bologna, Bologna, Italy, ou_persistent22              
4Metabolic Disease Unit, Edmond and Lily Safra Children's Hospital, Sheba Medical Center, Tel Hashomer, Israel, ou_persistent22              
5Genetics Department, Institute for Experimental Medicine, Istanbul University, Istanbul, Turkey, ou_persistent22              
6Unité de Génétique Médicale and Inserm, Laboratoire International Associéà l’UMR_S 910, Université Saint Joseph, Beirut, Lebanon, ou_persistent22              
7Department of Life and Earth Sciences, Faculty of Sciences, Branch II, Lebanese University, Beirut, Lebanon, ou_persistent22              

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Schlagwörter: inbreeding; disease allele frequency; autosomal recessive disorders; homozygosity index
 Zusammenfassung: In principle mutational records make it possible to estimate frequencies of disease alleles (q) for autosomal recessive disorders using a novel approach based on the calculation of the Homozygosity Index (HI), i.e., the proportion of homozygous patients, which is complementary to the proportion of compound heterozygous patients P(CH). In other words, the rarer the disorder, the higher will be the HI and the lower will be the P(CH). To test this hypothesis we used mutational records of individuals affected with Familial Mediterranean Fever (FMF) and Phenylketonuria (PKU), born to either consanguineous or apparently unrelated parents from six population samples of the Mediterranean region. Despite the unavailability of precise values of the inbreeding coefficient for the general population, which are needed in the case of apparently unrelated parents, our estimates of q are very similar to those of previous descriptive epidemiological studies. Finally, we inferred from simulation studies that the minimum sample size needed to use this approach is 25 patients either with unrelated or first cousin parents. These results show that the HI can be used to produce a ranking order of allele frequencies of autosomal recessive disorders, especially in populations with high rates of consanguineous marriages.

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Sprache(n): eng - English
 Datum: 2012
 Publikationsstatus: Erschienen
 Seiten: -
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: DOI: 10.1111/j.1469-1809.2011.00693.x
PMID: 22188137
 Art des Abschluß: -

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Titel: Annals of Human Genetics
Genre der Quelle: Zeitschrift
 Urheber:
Affiliations:
Ort, Verlag, Ausgabe: Wiley
Seiten: - Band / Heft: 76 Artikelnummer: - Start- / Endseite: 159 - 167 Identifikator: ISSN: 0003-4800
CoNE: https://pure.mpg.de/cone/journals/resource/954925340708