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  The implications of alternative splicing in the ENCODE protein complement

Tress, M. L., Martelli, P. L., Frankish, A., Reeves, G. A., Wesselink, J. J., Yeats, C., et al. (2007). The implications of alternative splicing in the ENCODE protein complement. Proceedings of the National Academy of Sciences, 104(13), 5495-5500. doi:10.1073/pnas.0700800104.

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Tress, Michael L., Autor
Martelli, Pier L., Autor
Frankish, Adam, Autor
Reeves, Gabrielle A., Autor
Wesselink, Jan J., Autor
Yeats, Corin, Autor
Ólason, Páll Í., Autor
Albrecht, Mario1, Autor           
Hegyi, Hedi, Autor
Giorgetti, Alejandro, Autor
Raimondo, Domenico, Autor
Lagarde, Julien, Autor
Laskowski, Roman A., Autor
López, Gonzalo, Autor
Sadowski, Michael I., Autor
Watson, James D., Autor
Fariselli, Piero, Autor
Rossi, Ivan, Autor
Nagy, Alinda, Autor
Kai, Wang, Autor
Størling, Zenia, AutorOrsini, Massimiliano, AutorAssenov, Yassen1, 2, Autor           Blankenburg, Hagen1, 2, Autor           Huthmacher, Carola1, Autor           Ramírez, Fidel3, AutorSchlicker, Andreas1, Autor           Denoued, France, AutorJones, Phil, AutorKerrien, Samuel, AutorOrchard, Sandra, AutorAntonarakis, Stylianos E., AutorReymond, Alexandre, AutorBirney, Ewan, AutorBrunak, Søren, AutorCasadio, Rita, AutorGuigo, Roderic, AutorHarrow, Jennifer, AutorHermjakob, Henning, AutorJones, David T., AutorLengauer, Thomas1, Autor           Orengo, Christine A., AutorPatthy, László, AutorThornton, Janet M., AutorTramontano, Anna, AutorValencia, Alfonso, Autor mehr..
Affiliations:
1Computational Biology and Applied Algorithmics, MPI for Informatics, Max Planck Society, ou_40046              
2International Max Planck Research School, MPI for Informatics, Max Planck Society, ou_1116551              
3Max Planck Society, ou_persistent13              

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 Zusammenfassung: Alternative premessenger RNA splicing enables genes to generate more than one gene product. Splicing events that occur within protein coding regions have the potential to alter the biological function of the expressed protein and even to create new protein functions. Alternative splicing has been suggested as one explanation for the discrepancy between the number of human genes and functional complexity. Here, we carry out a detailed study of the alternatively spliced gene products annotated in the ENCODE pilot project. We find that alternative splicing in human genes is more frequent than has commonly been suggested, and we demonstrate that many of the potential alternative gene products will have markedly different structure and function from their constitutively spliced counterparts. For the vast majority of these alternative isoforms, little evidence exists to suggest they have a role as functional proteins, and it seems unlikely that the spectrum of conventional enzymatic or structural functions can be substantially extended through alternative splicing .

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Sprache(n): eng - English
 Datum: 2008-02-282007
 Publikationsstatus: Erschienen
 Seiten: -
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: Expertenbegutachtung
 Identifikatoren: eDoc: 356659
DOI: 10.1073/pnas.0700800104
Anderer: Local-ID: C12573CC004A8E26-67A2E9CA60FAAE03C12572A4003BF017-Albrecht2007c
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Titel: Proceedings of the National Academy of Sciences
Genre der Quelle: Zeitschrift
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Seiten: - Band / Heft: 104 (13) Artikelnummer: - Start- / Endseite: 5495 - 5500 Identifikator: ISSN: 0027-8424