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  Genetic diagnosis of Mendelian disorders via RNA sequencing

Kremer, L. S., Bader, D. M., Mertes, C., Kopajtich, R., Pichler, G., Iuso, A., et al. (2017). Genetic diagnosis of Mendelian disorders via RNA sequencing. Nature Communications, 8: 15824. doi:10.1038/ncomms15824.

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 Urheber:
Kremer, Laura S.1, Autor
Bader, Daniel M.1, Autor
Mertes, Christian1, Autor
Kopajtich, Robert1, Autor
Pichler, Garwin2, Autor           
Iuso, Arcangela1, Autor
Haack, Tobias B.1, Autor
Graf, Elisabeth1, Autor
Schwarzmayr, Thomas1, Autor
Terrile, Caterina1, Autor
Konarikova, Eliska1, Autor
Repp, Birgit1, Autor
Kastenmueller, Gabi1, Autor
Adamski, Jerzy1, Autor
Lichtner, Peter1, Autor
Leonhardt, Christoph1, Autor
Funalot, Benoit1, Autor
Donati, Alice1, Autor
Tiranti, Valeria1, Autor
Lombes, Anne1, Autor
Jardel, Claude1, AutorGlaeser, Dieter1, AutorTaylor, Robert W.1, AutorGhezzi, Daniele1, AutorMayr, Johannes A.1, AutorRoetig, Agnes1, AutorFreisinger, Peter1, AutorDistelmaier, Felix1, AutorStrom, Tim M.1, AutorMeitinger, Thomas1, AutorGagneur, Julien1, AutorProkisch, Holger1, Autor mehr..
Affiliations:
1external, ou_persistent22              
2Mann, Matthias / Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Max Planck Society, ou_1565159              

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Schlagwörter: RANDOM MONOALLELIC EXPRESSION; PERRAULT SYNDROME; COMPLEX I; MUTATIONS; TOOL; DISEASE; SNP; MITOCHONDRIA; ASSOCIATION; DEFICIENCYScience & Technology - Other Topics;
 Zusammenfassung: Across a variety of Mendelian disorders, similar to 50-75% of patients do not receive a genetic diagnosis by exome sequencing indicating disease-causing variants in non-coding regions. Although genome sequencing in principle reveals all genetic variants, their sizeable number and poorer annotation make prioritization challenging. Here, we demonstrate the power of transcriptome sequencing to molecularly diagnose 10% (5 of 48) of mitochondriopathy patients and identify candidate genes for the remainder. We find a median of one aberrantly expressed gene, five aberrant splicing events and six mono-allelically expressed rare variants in patient-derived fibroblasts and establish disease-causing roles for each kind. Private exons often arise from cryptic splice sites providing an important clue for variant prioritization. One such event is found in the complex I assembly factor TIMMDC1 establishing a novel disease-associated gene. In conclusion, our study expands the diagnostic tools for detecting non-exonic variants and provides examples of intronic loss-of-function variants with pathological relevance.

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Sprache(n): eng - English
 Datum: 2017-06-12
 Publikationsstatus: Online veröffentlicht
 Seiten: 11
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: -
 Identifikatoren: ISI: 000403069900001
DOI: 10.1038/ncomms15824
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Titel: Nature Communications
  Kurztitel : Nat. Commun.
Genre der Quelle: Zeitschrift
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Ort, Verlag, Ausgabe: London : Nature Publishing Group
Seiten: - Band / Heft: 8 Artikelnummer: 15824 Start- / Endseite: - Identifikator: ISSN: 2041-1723
CoNE: https://pure.mpg.de/cone/journals/resource/2041-1723