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  Parsing parallel evolution: ecological divergence and differential gene expression in the adaptive radiations of thick-lipped Midas cichlid fishes from Nicaragua

Manousaki, T., Hull, P. M., Kusche, H., Machadi-Schiaffino, G., Franchini, P., Harrod, C., Elmer, K. R., & Meyer, A. (2013). Parsing parallel evolution: ecological divergence and differential gene expression in the adaptive radiations of thick-lipped Midas cichlid fishes from Nicaragua. Molecular Ecology, 22(3), 650-669. doi:10.1111/mec.12034.

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資料種別: 学術論文

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Manousaki_2013.pdf (出版社版), 2MB
 
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 作成者:
Manousaki, Tereza, 著者
Hull, Pincelli M., 著者
Kusche, Henrik, 著者
Machadi-Schiaffino, Gonzalo, 著者
Franchini, Paolo, 著者
Harrod, Chris1, 著者           
Elmer, Kathryn R., 著者
Meyer, Axel, 著者
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1Department Evolutionary Genetics, Max Planck Institute for Evolutionary Biology, Max Planck Society, ou_1445635              

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キーワード: crater lakes; divergent selection; geometric morphometrics; next-generation sequencing; RNA-Seq; sympatric speciation
 要旨: The study of parallel evolution facilitates the discovery of common rules of diversification. Here, we examine the repeated evolution of thick lips in Midas cichlid fishes (the Amphilophus citrinellus species complex)—from two Great Lakes and two crater lakes in Nicaragua—to assess whether similar changes in ecology, phenotypic trophic traits and gene expression accompany parallel trait evolution. Using next-generation sequencing technology, we characterize transcriptome-wide differential gene expression in the lips of wild-caught sympatric thick- and thin-lipped cichlids from all four instances of repeated thick-lip evolution. Six genes (apolipoprotein D, myelin-associated glycoprotein precursor, four-and-a-half LIM domain protein 2, calpain-9, GTPase IMAP family member 8-like and one hypothetical protein) are significantly underexpressed in the thick-lipped morph across all four lakes. However, other aspects of lips’ gene expression in sympatric morphs differ in a lake-specific pattern, including the magnitude of differentially expressed genes (97-510). Generally, fewer genes are differentially expressed among morphs in the younger crater lakes than in those from the older Great Lakes. Body shape, lower pharyngeal jaw size and shape, and stable isotopes (d13C and d15N) differ between all sympatric morphs, with the greatest differentiation in the Great Lake Nicaragua. Some ecological traits evolve in parallel (those related to foraging ecology; e.g. lip size, body and head shape) but others, somewhat surprisingly, do not (those related to diet and food processing; e.g. jaw size and shape, stable isotopes). Taken together, this case of parallelism among thick- and thin-lipped cichlids shows a mosaic pattern of parallel and nonparallel evolution.

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言語: eng - English
 日付: 2012-06-112012-03-302012-07-262012-10-122013-02
 出版の状態: 出版
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 識別子(DOI, ISBNなど): DOI: 10.1111/mec.12034
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出版物 1

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出版物名: Molecular Ecology
種別: 学術雑誌
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出版社, 出版地: Oxford : Blackwell Science
ページ: - 巻号: 22 (3) 通巻号: - 開始・終了ページ: 650 - 669 識別子(ISBN, ISSN, DOIなど): ISSN: 0962-1083 (print)
ISSN: 1365-294X (online)
CoNE: https://pure.mpg.de/cone/journals/resource/954925580119