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  A modelling approach to quantify dynamic crosstalk between the pheromone and the starvation pathway in baker's yeast

Schaber, J., Kofahl, B., Kowald, A., & Klipp, E. (2006). A modelling approach to quantify dynamic crosstalk between the pheromone and the starvation pathway in baker's yeast. FEBS Journal, 273(15), 3520-3533. doi:10.1111/j.1742-4658.2006.05359.x.

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資料種別: 学術論文

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Klipp.pdf (全文テキスト(全般)), 420KB
ファイルのパーマリンク:
https://hdl.handle.net/11858/00-001M-0000-0010-83D5-6
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Klipp.pdf
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公開
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application/pdf / [MD5]
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eDoc_access: PUBLIC
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 作成者:
Schaber, Jörg1, 著者
Kofahl, Bente, 著者
Kowald, Axel2, 著者           
Klipp, Edda2, 著者           
所属:
1Max Planck Society, ou_persistent13              
2Independent Junior Research Groups (OWL), Max Planck Institute for Molecular Genetics, Max Planck Society, ou_1433554              

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 要旨: Cells must be able to process multiple information in parallel and, moreover, they must also be able to combine this information in order to trigger the appropriate response. This is achieved by wiring signalling pathways such that they can interact with each other, a phenomenon often called crosstalk. In this study, we employ mathematical modelling techniques to analyse dynamic mechanisms and measures of crosstalk. We present a dynamic mathematical model that compiles current knowledge about the wiring of the pheromone pathway and the filamentous growth pathway in yeast. We consider the main dynamic features and the interconnections between the two pathways in order to study dynamic crosstalk between these two pathways in haploid cells. We introduce two new measures of dynamic crosstalk, the intrinsic specificity and the extrinsic specificity. These two measures incorporate the combined signal of several stimuli being present simultaneously and seem to be more stable than previous measures. When both pathways are responsive and stimulated, the model predicts that (a) the filamentous growth pathway amplifies the response of the pheromone pathway, and (b) the pheromone pathway inhibits the response of filamentous growth pathway in terms of mitogen activated protein kinase activity and transcriptional activity, respectively. Among several mechanisms we identified leakage of activated Ste11 as the most influential source of crosstalk. Moreover, we propose new experiments and predict their outcomes in order to test hypotheses about the mechanisms of crosstalk between the two pathways. Studying signals that are transmitted in parallel gives us new insights about how pathways and signals interact in a dynamical way, e.g., whether they amplify, inhibit, delay or accelerate each other.

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言語: eng - English
 日付: 2006-08
 出版の状態: 出版
 ページ: -
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 識別子(DOI, ISBNなど): eDoc: 312983
DOI: 10.1111/j.1742-4658.2006.05359.x
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出版物 1

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出版物名: FEBS Journal
種別: 学術雑誌
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出版社, 出版地: -
ページ: - 巻号: 273 (15) 通巻号: - 開始・終了ページ: 3520 - 3533 識別子(ISBN, ISSN, DOIなど): ISSN: 1742-464X